1CV9 Immune System date Aug 23, 1999
title Nmr Study Of Itam Peptide Substrate
authors B.S.Gaul, M.L.Harrison, R.L.Geahlen, C.B.Post
compound source
Molecule: Ig-Alpha Itam Peptide
Chain: A
Fragment: Residues 178-189
Engineered: Yes
 Synthetic: Yes
Other_details: Sequence From Human Ig-Alpha Itam
methodSolution NMR
ligand ACE, NH2 enzyme
Primary referenceSubstrate recognition by the Lyn protein-tyrosine kinase. NMR structure of the immunoreceptor tyrosine-based activation motif signaling region of the B cell antigen receptor., Gaul BS, Harrison ML, Geahlen RL, Burton RA, Post CB, J Biol Chem 2000 May 26;275(21):16174-82. PMID:10748115
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (6 Kb) [Save to disk]
  • Biological Unit Coordinates (1cv9.pdb1.gz) 3 Kb
  • LPC: Ligand-Protein Contacts for 1CV9
  • CSU: Contacts of Structural Units for 1CV9
  • Retrieve 1CV9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CV9 from S2C, [Save to disk]
    • View 1CV9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1CV9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CV9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cv9a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cv9_A] [1cv9]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1CV9
  • Community annotation for 1CV9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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