1CW3 Oxidoreductase date Aug 25, 1999
title Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+
authors L.Ni, J.Zhou, T.D.Hurley, H.Weiner
compound source
Molecule: Mitochondrial Aldehyde Dehydrogenase
Chain: A, B, C, D, E, F, G, H
Fragment: Complete Mature Sequence (Does Not Include Mitochondrial Leader Sequence);
Synonym: Aldhi, Aldh-E2
Ec: 1.2.1.3
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Liver
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet
symmetry Space Group: P 1 21 1
R_factor 0.175 R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
101.400 176.300 102.000 90.00 94.70 90.00
method X-Ray Diffractionresolution 2.58 Å
ligand MG, MN, NAD enzyme Oxidoreductase E.C.1.2.1.3 BRENDA
related structures by homologous chain: 1NZZ, 1O00
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceHuman liver mitochondrial aldehyde dehydrogenase: three-dimensional structure and the restoration of solubility and activity of chimeric forms., Ni L, Zhou J, Hurley TD, Weiner H, Protein Sci 1999 Dec;8(12):2784-90. PMID:10631996
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (651 Kb) [Save to disk]
  • Biological Unit Coordinates (1cw3.pdb1.gz) 325 Kb
  • Biological Unit Coordinates (1cw3.pdb2.gz) 326 Kb
  • LPC: Ligand-Protein Contacts for 1CW3
  • CSU: Contacts of Structural Units for 1CW3
  • Likely Quarternary Molecular Structure file(s) for 1CW3
  • Structure Factors (793 Kb)
  • Retrieve 1CW3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CW3 from S2C, [Save to disk]
  • Re-refined 1cw3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CW3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CW3
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1CW3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cw3a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1cw3b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1cw3c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1cw3d_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1cw3e_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1cw3f_, region F [Jmol] [rasmolscript] [script source]
        - Domain d1cw3g_, region G [Jmol] [rasmolscript] [script source]
        - Domain d1cw3h_, region H [Jmol] [rasmolscript] [script source]
  • Fold representative 1cw3 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cw3_H] [1cw3_B] [1cw3_C] [1cw3_A] [1cw3_G] [1cw3_E] [1cw3_D] [1cw3] [1cw3_F]
  • SWISS-PROT database: [P05091]
  • Domain organization of [ALDH2_HUMAN] by SWISSPFAM
  • Other resources with information on 1CW3
  • Community annotation for 1CW3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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