1CWE Transferase Peptide date Sep 06, 1995
title Human P56lck Tyrosine Kinase Complexed With Phosphopeptide
authors V.Mikol
compound source
Molecule: P56lck Tyrosine Kinase
Chain: A, C
Fragment: Phosphotyrosine Recognition Domain Sh2
Ec: 2.7.1.112
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Phosphopeptide Acq-Pmp-Glu-Glu-Ile-Pro
Chain: B, D
Engineered: Yes

Synthetic: Yes
Organism_taxid: 32630
Other_details: Synthesized Using Step-Wise Na-Fmoc Strategy
symmetry Space Group: P 1
R_factor 0.192 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.170 41.840 45.520 68.71 82.94 87.36
method X-Ray Diffractionresolution 2.30 Å
ligand PM3 enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1CWD, 1FBZ
Primary referenceThe crystal structures of the SH2 domain of p56lck complexed with two phosphonopeptides suggest a gated peptide binding site., Mikol V, Baumann G, Keller TH, Manning U, Zurini MG, J Mol Biol 1995 Feb 17;246(2):344-55. PMID:7532720
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (44 Kb) [Save to disk]
  • Biological Unit Coordinates (1cwe.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 1CWE
  • CSU: Contacts of Structural Units for 1CWE
  • Likely Quarternary Molecular Structure file(s) for 1CWE
  • Retrieve 1CWE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CWE from S2C, [Save to disk]
  • View 1CWE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CWE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CWE, from MSDmotif at EBI
  • Genome occurence of 1CWE's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cwea_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1cwec_, region C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cwe] [1cwe_A] [1cwe_B] [1cwe_D] [1cwe_C]
  • SWISS-PROT database: [P06239]
  • Domain organization of [LCK_HUMAN] by SWISSPFAM
  • Domain found in 1CWE: [SH2 ] by SMART
  • Other resources with information on 1CWE
  • Community annotation for 1CWE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1CWE from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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