1CXW THE SECOND TYPE II MODULE FROM HUMAN MATRIX METALLOPROTEINASE 2 date
authors Briknarova, K., Grishaev, A., Banyai, L., Tordai, H., Patthy, L., Llinas, M.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 50 Modelsresolution
related structures by homologous chain: 1CK7
Primary referenceThe second type II module from human matrix metalloproteinase 2: structure, function and dynamics., Briknarova K, Grishaev A, Banyai L, Tordai H, Patthy L, Llinas M, Structure Fold Des 1999 Oct 15;7(10):1235-45. PMID:10545322
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (719 Kb) [Save to disk]
  • Biological Unit Coordinates (1cxw.pdb1.gz) 15 Kb
  • CSU: Contacts of Structural Units for 1CXW
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1CXW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CXW from S2C, [Save to disk]
    • View 1CXW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1CXW
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CXW, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cxwa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cxw] [1cxw_A]
  • SWISS-PROT database: [P08253]
  • Domain organization of [MMP2_HUMAN] by SWISSPFAM
  • Domain found in 1CXW: [FN2 ] by SMART
    • Other resources with information on 1CXW
  • Community annotation for 1CXW at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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