1CZ3 Oxidoreductase date Sep 01, 1999
title Dihydrofolate Reductase From Thermotoga Maritima
authors T.Dams, G.Auerbach, G.Bader, T.Ploom, R.Huber, R.Jaenicke
compound source
Molecule: Dihydrofolate Reductase
Chain: A, B
Ec: 1.5.1.3
Engineered: Yes
Organism_scientific: Thermotoga Maritima
Organism_taxid: 2336
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Ptd(Trc)
symmetry Space Group: C 1 2 1
R_factor 0.203 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
131.605 36.051 97.025 90.00 130.69 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand SO4 enzyme Oxidoreductase E.C.1.5.1.3 BRENDA
related structures by homologous chain: 1D1G
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe crystal structure of dihydrofolate reductase from Thermotoga maritima: molecular features of thermostability., Dams T, Auerbach G, Bader G, Jacob U, Ploom T, Huber R, Jaenicke R, J Mol Biol 2000 Mar 31;297(3):659-72. PMID:10731419
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (1cz3.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1CZ3
  • CSU: Contacts of Structural Units for 1CZ3
  • Likely Quarternary Molecular Structure file(s) for 1CZ3
  • Structure Factors (146 Kb)
  • Retrieve 1CZ3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1CZ3 from S2C, [Save to disk]
  • Re-refined 1cz3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1CZ3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1CZ3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1CZ3, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1cz3a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1cz3b_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1cz3_A] [1cz3_B] [1cz3]
  • SWISS-PROT database: [Q60034]
  • Domain organization of [DYR_THEMA] by SWISSPFAM
  • Other resources with information on 1CZ3
  • Community annotation for 1CZ3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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