1D53 CRYSTAL STRUCTURE AT 1.5 ANGSTROMS RESOLUTION OF D(CGCICICG), AN OCTANUCLEOTIDE CONTAINING INOSINE, AND ITS COMPARISON WITH D(CGCG) AND D(CGCGCG) STRUCTURES date
authors Kumar, V.D., Harrison, R.W., Andrews, L.C., Weber, I.T.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
Primary referenceCrystal structure at 1.5-A resolution of d(CGCICICG), an octanucleotide containing inosine, and its comparison with d(CGCG) and d(CGCGCG) structures., Kumar VD, Harrison RW, Andrews LC, Weber IT, Biochemistry 1992 Feb 11;31(5):1541-50. PMID:1737011
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk]
  • Biological Unit Coordinates (1d53.pdb1.gz) 7 Kb
  • Biological Unit Coordinates (1d53.pdb2.gz) 7 Kb
  • CSU: Contacts of Structural Units for 1D53
  • Likely Quarternary Molecular Structure file(s) for 1D53
  • Retrieve 1D53 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1D53 from S2C, [Save to disk]
    • View 1D53 in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1D53
  • Ramachandran plot from PDBSum
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  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1D53, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1d53_A] [1d53_C] [1d53] [1d53_D] [1d53_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 1D53
  • Community annotation for 1D53 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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