1D7Q Gene Regulation date Oct 19, 1999
title Human Translation Initiation Factor Eif1a
authors J.L.Battiste, T.V.Pestova, C.U.T.Hellen, G.Wagner
compound source
Molecule: Protein (N-Terminal Histidine Tag)
Chain: B
Engineered: Yes
Synthetic: Yes
Other_details: Histidine Tag Is Engineered Into The Vector Expressed With The Protein;

Molecule: Translation Initiation Factor 1a
Chain: A
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe31
methodSolution NMR
note 1D7Q is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe eIF1A solution structure reveals a large RNA-binding surface important for scanning function., Battiste JL, Pestova TV, Hellen CU, Wagner G, Mol Cell 2000 Jan;5(1):109-19. PMID:10678173
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (843 Kb) [Save to disk]
  • Biological Unit Coordinates (1d7q.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 1D7Q
  • Original NMR restraints for 1D7Q from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1D7Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1D7Q from S2C, [Save to disk]
  • View 1D7Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1D7Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1D7Q, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1d7qa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1d7q_B] [1d7q] [1d7q_A]
  • SWISS-PROT database: [P47813]
  • Domain organization of [IF1AX_HUMAN] by SWISSPFAM
  • Domain found in 1D7Q: [eIF1a ] by SMART
  • Other resources with information on 1D7Q
  • Community annotation for 1D7Q at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science