1D8F date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, SPI, ZN BindingDB enzyme
related structures by homologous chain: 1D8M, 456C
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDesign and synthesis of piperazine-based matrix metalloproteinase inhibitors., Cheng M, De B, Pikul S, Almstead NG, Natchus MG, Anastasio MV, McPhail SJ, Snider CE, Taiwo YO, Chen L, Dunaway CM, Gu F, Dowty ME, Mieling GE, Janusz MJ, Wang-Weigand S, J Med Chem 2000 Feb 10;43(3):369-80. PMID:10669564
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (1d8f.pdb1.gz) 28 Kb
  • Biological Unit Coordinates (1d8f.pdb2.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 1D8F
  • CSU: Contacts of Structural Units for 1D8F
  • Likely Quarternary Molecular Structure file(s) for 1D8F
  • Retrieve 1D8F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1D8F from S2C, [Save to disk]
  • View 1D8F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1d8f] [1d8f_A] [1d8f_B]
  • SWISS-PROT database: [P08254]
  • Domain found in 1D8F: [ZnMc ] by SMART

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