1DD7 MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DOMAIN (DELTA 114) (N-[(1,3-BENZODIOXOL-5-YL)METHYL]-1-[2-(1H-IMIDAZOL-1-YL)PYRIMIDIN-4-YL]-4-(METHOXYCARBONYL)-PIPERAZINE-2-ACETAMIDE COMPLEX date
authors Adler, M., Whitlow, M.
compound source
symmetry
R_factor
R_Free 0.2840000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.25
ligand 1PM, HEM, SO3 BindingDB enzyme
related structures by homologous chain: 1RS9, 4NOS
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAllosteric inhibitors of inducible nitric oxide synthase dimerization discovered via combinatorial chemistry., McMillan K, Adler M, Auld DS, Baldwin JJ, Blasko E, Browne LJ, Chelsky D, Davey D, Dolle RE, Eagen KA, Erickson S, Feldman RI, Glaser CB, Mallari C, Morrissey MM, Ohlmeyer MH, Pan G, Parkinson JF, Phillips GB, Polokoff MA, Sigal NH, Vergona R, Whitlow M, Young TA, Devlin JJ, Proc Natl Acad Sci U S A 2000 Feb 15;97(4):1506-11. PMID:10677491
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (1dd7.pdb1.gz) 140 Kb
  • LPC: Ligand-Protein Contacts for 1DD7
  • CSU: Contacts of Structural Units for 1DD7
  • Likely Quarternary Molecular Structure file(s) for 1DD7
  • Structure Factors (177 Kb)
  • Retrieve 1DD7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DD7 from S2C, [Save to disk]
  • Re-refined 1dd7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1DD7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1DD7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DD7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dd7a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dd7] [1dd7_A]
  • SWISS-PROT database: [P29477]
  • Domain organization of [NOS2_MOUSE] by SWISSPFAM
    • Other resources with information on 1DD7
  • Community annotation for 1DD7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science