1DEH	Oxidoreductase	date	Oct 14, 1995
title	Crystallization Of Human Beta1 Alcohol Dehydrogenase (15 Mg Mm Sodium Phosphate (Ph 7.5), 2.0 Mm Nad+ And 1 Mm 4-Iodopy 25 Oc, 13% (Wv) Peg 8000
authors	T.D.Hurley, G.J.Davis
compound		source
Molecule: Human Beta1 Alcohol Dehydrogenase Chain: A, B Synonym: Beta1 Adh Ec: 1.1.1.1 Engineered: Yes Other_details: The Structure For Homodimeric Beta1 Alcohol Dehydrogenase Was Solved With One Nad+ And One 4-Iodopyrazo Subunit		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Organ: Liver Gene: Human Beta1 Cdna Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Pkk223-3 Expression_system_gene: Human Beta1 Cdna Other_details: Adh2 - Standard Convention Is To Denote The Polymorphism With A 1 In Superscript, I.E., Adh2==1==)
symmetry	Space Group: P 1	R_factor 0.180 R_Free 0.261
crystal cell	length a length b length c angle alpha angle beta angle gamma 54.040 44.540 93.320 92.56 103.26 68.84
method	X-Ray Diffraction	resolution	2.20 Å
ligand	CL, NAD, PYZ, ZN	enzyme	Oxidoreductase E.C.1.1.1.1 BRENDA
related structures	by homologous chain: 1HLD, 1MP0
Gene Ontology	Chain Function Process Component A, B
Primary reference	X-ray structure of human beta3beta3 alcohol dehydrogenase. The contribution of ionic interactions to coenzyme binding., Davis GJ, Bosron WF, Stone CL, Owusu-Dekyi K, Hurley TD, J Biol Chem 1996 Jul 19;271(29):17057-61. PMID:8663387

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk] Biological Unit Coordinates (1deh.pdb1.gz) 120 Kb LPC: Ligand-Protein Contacts for 1DEH CSU: Contacts of Structural Units for 1DEH Likely Quarternary Molecular Structure file(s) for 1DEH Structure Factors (245 Kb) Retrieve 1DEH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1DEH from S2C, [Save to disk] Re-refined 1deh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1DEH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1DEH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1DEH, from MSDmotif at EBI Genome occurence of 1DEH's fold from GeneCensus Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1deha1, region A:1-162,A:339-374 [Jmol] [rasmolscript] [script source]     - Domain d1deha2, region A:163-338 [Jmol] [rasmolscript] [script source]     - Domain d1dehb1, region B:1-162,B:339-374 [Jmol] [rasmolscript] [script source]     - Domain d1dehb2, region B:163-338 [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1deh_A] [1deh] [1deh_B] SWISS-PROT database: [P00325] Domain organization of [ADH1B_HUMAN] by SWISSPFAM

Other resources with information on 1DEH

Community annotation for 1DEH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1DEH from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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