1DEP Membrane Protein date Aug 23, 1995
title Membrane Protein, Nmr, 1 Structure
authors H.Jung, K.D.Schnackerz
compound source
Molecule: T345-359
Chain: A
Engineered: Yes
Other_details: The Peptide T345-359 Represents The Fourth Intracellular Loop Of The Beta-Adrenoceptor From Turkey
 Organism_scientific: Meleagris Gallopavo
Organism_common: Turkey
Organism_taxid: 9103
methodSolution NMR
Primary referenceNMR and circular dichroism studies of synthetic peptides derived from the third intracellular loop of the beta-adrenoceptor., Jung H, Windhaber R, Palm D, Schnackerz KD, FEBS Lett 1995 Jan 23;358(2):133-6. PMID:7828722
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (7 Kb) [Save to disk]
  • Biological Unit Coordinates (1dep.pdb1.gz) 5 Kb
  • CSU: Contacts of Structural Units for 1DEP
  • Original NMR restraints for 1DEP from PDB
  • Retrieve 1DEP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DEP from S2C, [Save to disk]
    • View 1DEP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1DEP
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DEP, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dep__, region [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dep] [1dep_A]
  • SWISS-PROT database: [P07700]
  • Domain organization of [ADRB1_MELGA] by SWISSPFAM
    • Other resources with information on 1DEP
  • Community annotation for 1DEP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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