1DFS Metal Binding Protein date Nov 20, 1999
title Solution Structure Of The Alpha-Domain Of Mouse Metallothion
authors K.Zangger, G.Oz, J.D.Otvos, I.M.Armitage
compound source
Molecule: Metallothionein-1
Chain: A
Fragment: C-Terminal Domain (Alpha)
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet3d
methodSolution NMR
ligand CD enzyme
related structures by homologous chain: 1JI9, 1MRT, 4MT2
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree-dimensional solution structure of mouse [Cd7]-metallothionein-1 by homonuclear and heteronuclear NMR spectroscopy., Zangger K, Oz G, Otvos JD, Armitage IM, Protein Sci 1999 Dec;8(12):2630-8. PMID:10631978
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (11 Kb) [Save to disk]
  • Biological Unit Coordinates (1dfs.pdb1.gz) 8 Kb
  • LPC: Ligand-Protein Contacts for 1DFS
  • CSU: Contacts of Structural Units for 1DFS
  • Original NMR restraints for 1DFS from PDB
  • Retrieve 1DFS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DFS from S2C, [Save to disk]
  • View 1DFS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1DFS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DFS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dfsa_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dfs] [1dfs_A]
  • SWISS-PROT database: [P02802]
  • Domain organization of [MT1_MOUSE] by SWISSPFAM
  • Other resources with information on 1DFS
  • Community annotation for 1DFS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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