1DG6 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, ZN enzyme
note 1DG6 is a representative structure
related structures by homologous chain: 1D4V
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA unique zinc-binding site revealed by a high-resolution X-ray structure of homotrimeric Apo2L/TRAIL., Hymowitz SG, O'Connell MP, Ultsch MH, Hurst A, Totpal K, Ashkenazi A, de Vos AM, Kelley RF, Biochemistry 2000 Feb 1;39(4):633-40. PMID:10651627
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (1dg6.pdb1.gz) 88 Kb
  • LPC: Ligand-Protein Contacts for 1DG6
  • CSU: Contacts of Structural Units for 1DG6
  • Likely Quarternary Molecular Structure file(s) for 1DG6
  • Structure Factors (411 Kb)
  • Retrieve 1DG6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DG6 from S2C, [Save to disk]
  • Re-refined 1dg6 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1DG6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dg6] [1dg6_A]
  • SWISS-PROT database: [P50591]
  • Domain found in 1DG6: [TNF ] by SMART

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