1DGX SYNTHETIC HUMAN COMBINATORIAL ANTIBODY LIBRARY (HUCAL) FRAMEWORK VL KAPPA 1 date 1999-11-26
authors Knappik, A, Pack, P, Ge, L, Honegger, A, Fischer, M, Wellnhofer, G, Hoess, A, Woelle, J, Plueckthun, A, Virnekaes, B
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceFully synthetic human combinatorial antibody libraries (HuCAL) based on modular consensus frameworks and CDRs randomized with trinucleotides., Knappik A, Ge L, Honegger A, Pack P, Fischer M, Wellnhofer G, Hoess A, Wolle J, Pluckthun A, Virnekas B, J Mol Biol 2000 Feb 11;296(1):57-86. PMID:10656818
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1DGX
  • SEQRES to COORDINATES correlation for 1DGX from S2C, [Save to disk]
    • View 1DGX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1DGX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • SWISS-PROT database: [P01600]
  • Domain organization of [KV108_HUMAN] by SWISSPFAM
    • Other resources with information on 1DGX
  • Community annotation for 1DGX at PDBWiki (http://pdbwiki.org)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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