1DLG Transferase date Dec 09, 1999
title Crystal Structure Of The C115s Enterobacter Cloacae Mura In Liganded State
authors E.Schonbrunn, S.Eschenburg, F.Krekel, K.Luger, N.Amrhein
compound source
Molecule: Udp-N-Acetylglucosamine Enolpyruvyl Transferase M
Chain: A, B
Ec: 2.5.1.7
Engineered: Yes
Mutation: Yes
Organism_scientific: Enterobacter Cloacae
Organism_taxid: 550
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.173 R_Free 0.197
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.685 155.532 83.820 90.00 91.82 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand HAI, IAS, PO4 enzyme Transferase E.C.2.5.1.7 BRENDA
related structures by homologous chain: 1NAW, 1UAE
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceRole of the loop containing residue 115 in the induced-fit mechanism of the bacterial cell wall biosynthetic enzyme MurA., Schonbrunn E, Eschenburg S, Krekel F, Luger K, Amrhein N, Biochemistry 2000 Mar 7;39(9):2164-73. PMID:10694381
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (155 Kb) [Save to disk]
  • Biological Unit Coordinates (1dlg.pdb1.gz) 76 Kb
  • Biological Unit Coordinates (1dlg.pdb2.gz) 75 Kb
  • Biological Unit Coordinates (1dlg.pdb3.gz) 294 Kb
  • LPC: Ligand-Protein Contacts for 1DLG
  • CSU: Contacts of Structural Units for 1DLG
  • Likely Quarternary Molecular Structure file(s) for 1DLG
  • Retrieve 1DLG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DLG from S2C, [Save to disk]
  • View 1DLG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1DLG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DLG, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dlga_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1dlgb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dlg_B] [1dlg_A] [1dlg]
  • SWISS-PROT database: [P33038]
  • Domain organization of [MURA_ENTCL] by SWISSPFAM
  • Other resources with information on 1DLG
  • Community annotation for 1DLG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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