1DPQ Cell Adhesion date Dec 27, 1999
title Solution Structure Of The Constitutively Active Mutant Of The Integrin Alpha Iib Cytoplasmic Domain.
authors O.Vinogradova, T.Haas, E.F.Plow, J.Qin
compound source
Molecule: Integrin Alpha-Iib Subunit
Chain: A
Fragment: Cytoplasmic Domain
Engineered: Yes
Mutation: Yes
Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized. The Sequence Of Residues Is Naturally Found In The Platelets Of Homo Sapiens (Human).
methodSolution NMR
Primary referenceA structural basis for integrin activation by the cytoplasmic tail of the alpha IIb-subunit., Vinogradova O, Haas T, Plow EF, Qin J, Proc Natl Acad Sci U S A 2000 Feb 15;97(4):1450-5. PMID:10677482
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (51 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1DPQ
  • Retrieve 1DPQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DPQ from S2C, [Save to disk]
  • View 1DPQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1DPQ
  • Cartoon representation from PDB Cartoon
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  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1DPQ, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dpqa_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1dpq from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dpq] [1dpq_A]
  • SWISS-PROT database: [P08514]
  • Domain organization of [ITA2B_HUMAN] by SWISSPFAM
  • Other resources with information on 1DPQ
  • Community annotation for 1DPQ at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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