1DUM date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffraction, 10 Modelsresolution
Primary referenceEffects of peptide dimerization on pore formation: Antiparallel disulfide-dimerized magainin 2 analogue., Hara T, Kodama H, Kondo M, Wakamatsu K, Takeda A, Tachi T, Matsuzaki K, Biopolymers 2001 Apr 5;58(4):437-46. PMID:11180056
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk]
  • Biological Unit Coordinates (1dum.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 1DUM
  • Original NMR restraints for 1DUM from PDB
  • Retrieve 1DUM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DUM from S2C, [Save to disk]
    • View 1DUM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dum_B] [1dum_A] [1dum]
  • SWISS-PROT database: [P11006]
  • Belongs to the magainin (magainin) family according to TCDB.

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