1DZ7 Glycoprotein date Feb 18, 2000
title Solution Structure Of The A-Subunit Of Human Chorionic Gonad [Modeled Without Carbohydrate Residues]
authors P.J.A.Erbel, Y.Karimi-Nejad, T.De Beer, R.Boelens, J.P.Kamerling J.F.G.Vliegenthart
compound source
Molecule: Chorionic Gonadotropin
Chain: A
Other_details: Glycosylated At Asn52 And Asn78
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Isolated From Urine Of Pregnant Women
methodSolution NMR
related structures by homologous chain: 1E9J
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of the alpha-subunit of human chorionic gonadotropin., Erbel PJ, Karimi-Nejad Y, De Beer T, Boelens R, Kamerling JP, Vliegenthart JF, Eur J Biochem 1999 Mar;260(2):490-8. PMID:10095786
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (624 Kb) [Save to disk]
  • Biological Unit Coordinates (1dz7.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 1DZ7
  • Retrieve 1DZ7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1DZ7 from S2C, [Save to disk]
  • View 1DZ7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1DZ7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1DZ7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1dz7a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1dz7_A] [1dz7]
  • SWISS-PROT database: [P01215]
  • Domain organization of [GLHA_HUMAN] by SWISSPFAM
  • Domain found in 1DZ7: [GHA ] by SMART
  • Other resources with information on 1DZ7
  • Community annotation for 1DZ7 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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