1E0O Growth Factor date Apr 03, 2000
title Crystal Structure Of A Ternary Fgf1-Fgfr2-Heparin Complex
authors L.Pellegrini, D.F.Burke, F.Von Delft, B.Mulloy, T.L.Blundell
compound source
Molecule: Fibroblast Growth Factor 1
Chain: A, C
Synonym: Acidic Fibroblast Growth Factor
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet14a
Other_details: Recombinant

Molecule: Fibroblast Growth Factor Receptor 2
Chain: B, D
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet3a
Other_details: Recombinant
symmetry Space Group: P 62
R_factor 0.274 R_Free 0.309
crystal
cell
length a length b length c angle alpha angle beta angle gamma
195.900 195.900 68.860 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.80 Å
ligand IDS, NI, SGN, SO4 enzyme
related structures by homologous chain: 1AXM, 1EVT, 1NUN
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary referenceCrystal structure of fibroblast growth factor receptor ectodomain bound to ligand and heparin., Pellegrini L, Burke DF, von Delft F, Mulloy B, Blundell TL, Nature 2000 Oct 26;407(6807):1029-34. PMID:11069186
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (117 Kb) [Save to disk]
  • Biological Unit Coordinates (1e0o.pdb1.gz) 109 Kb
  • LPC: Ligand-Protein Contacts for 1E0O
  • CSU: Contacts of Structural Units for 1E0O
  • Likely Quarternary Molecular Structure file(s) for 1E0O
  • Retrieve 1E0O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E0O from S2C, [Save to disk]
  • View 1E0O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1E0O
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1E0O, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e0oa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1e0ob1, region B:149-250 [Jmol] [rasmolscript] [script source]
        - Domain d1e0ob2, region B:251-360 [Jmol] [rasmolscript] [script source]
        - Domain d1e0oc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1e0od1, region D:149-250 [Jmol] [rasmolscript] [script source]
        - Domain d1e0od2, region D:251-360 [Jmol] [rasmolscript] [script source]
  • Fold representative 1e0o from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e0o_B] [1e0o_C] [1e0o_D] [1e0o_A] [1e0o]
  • SWISS-PROT database: [P05230] [P21802]
  • Domain organization of [FGF1_HUMAN] [FGFR2_HUMAN] by SWISSPFAM
  • Domains found in 1E0O: [FGF] [IGc2 ] by SMART
  • Other resources with information on 1E0O
  • Community annotation for 1E0O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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