1E78 Carrier Protein date Aug 25, 2000
title Crystal Structure Of Human Serum Albumin
authors A.A.Bhattacharya, S.Curry, N.P.Franks
compound source
Molecule: Serum Albumin
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Saccharomyces Cerevisiae
Expression_system_taxid: 4932
symmetry Space Group: P 1
R_factor 0.247 R_Free 0.277
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.840 55.620 120.270 81.22 91.08 64.28
method X-Ray Diffractionresolution 2.6 Å
related structures by homologous chain: 1GNJ, 1HK1
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceBinding of the general anesthetics propofol and halothane to human serum albumin. High resolution crystal structures., Bhattacharya AA, Curry S, Franks NP, J Biol Chem 2000 Dec 8;275(49):38731-8. PMID:10940303
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (178 Kb) [Save to disk]
  • Biological Unit Coordinates (1e78.pdb1.gz) 89 Kb
  • Biological Unit Coordinates (1e78.pdb2.gz) 88 Kb
  • CSU: Contacts of Structural Units for 1E78
  • Likely Quarternary Molecular Structure file(s) for 1E78
  • Structure Factors (264 Kb)
  • Retrieve 1E78 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1E78 from S2C, [Save to disk]
  • Re-refined 1e78 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1E78 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1E78
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1E78, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1e78a2, region A:197-388 [Jmol] [rasmolscript] [script source]
        - Domain d1e78a3, region A:389-582 [Jmol] [rasmolscript] [script source]
        - Domain d1e78a1, region A:5-196 [Jmol] [rasmolscript] [script source]
        - Domain d1e78b2, region B:197-388 [Jmol] [rasmolscript] [script source]
        - Domain d1e78b3, region B:389-582 [Jmol] [rasmolscript] [script source]
        - Domain d1e78b1, region B:5-196 [Jmol] [rasmolscript] [script source]
  • Fold representative 1e78 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1e78_B] [1e78_A] [1e78]
  • SWISS-PROT database: [P02768]
  • Domain organization of [ALBU_HUMAN] by SWISSPFAM
  • Domain found in 1E78: [ALBUMIN ] by SMART
  • Alignments of the sequence of 1E78 with the sequences similar proteins can be viewed for 1E78's classification [ALBU_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [ALBU_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1E78
  • Community annotation for 1E78 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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