1ECY Protease Inhibitor date Aug 06, 1996
title Protease Inhibitor Ecotin
authors D.H.Shin, S.W.Suh
compound source
Molecule: Ecotin
Chain: A
Engineered: Yes
Other_details: Escherichia Coli Protease Inhibitor
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pbs
Expression_system_gene: Eti Gene
symmetry Space Group: P 43 21 2
R_factor 0.213 R_Free 0.319
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.320 63.320 84.130 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.19 Å
ligand BGC, GLC enzyme
related structures by homologous chain: 1IFG, 1SLX
Gene
Ontology
ChainFunctionProcessComponent
A
  • serine-type endopeptidase in...


  • Primary referenceCrystal structure analyses of uncomplexed ecotin in two crystal forms: implications for its function and stability., Shin DH, Song HK, Seong IS, Lee CS, Chung CH, Suh SW, Protein Sci 1996 Nov;5(11):2236-47. PMID:8931142
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1ecy.pdb1.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 1ECY
  • CSU: Contacts of Structural Units for 1ECY
  • Likely Quarternary Molecular Structure file(s) for 1ECY
  • Structure Factors (79 Kb)
  • Retrieve 1ECY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ECY from S2C, [Save to disk]
  • Re-refined 1ecy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ECY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ECY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ECY, from MSDmotif at EBI
  • Genome occurence of 1ECY's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ecy__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ecy] [1ecy_A]
  • SWISS-PROT database: [P23827]
  • Domain organization of [ECOT_ECOLI] by SWISSPFAM
  • Other resources with information on 1ECY
  • Community annotation for 1ECY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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