1EDP Vasoconstrictor date Dec 16, 1991
title Conformational Isomerism Of Endothelin In Acidic Aqueous Med Quantitative Noesy Analysis
authors N.H.Andersen, C.Chen
compound source
Molecule: Endothelin-1 Precursor
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceConformational isomerism of endothelin in acidic aqueous media: a quantitative NOESY analysis., Andersen NH, Chen CP, Marschner TM, Krystek SR Jr, Bassolino DA, Biochemistry 1992 Feb 11;31(5):1280-95. PMID:1736987
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (6 Kb) [Save to disk]
  • Biological Unit Coordinates (1edp.pdb1.gz) 5 Kb
  • CSU: Contacts of Structural Units for 1EDP
  • Original NMR restraints for 1EDP from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1EDP in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EDP from S2C, [Save to disk]
  • View 1EDP in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EDP
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1EDP, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1edp__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1edp from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1edp] [1edp_A]
  • SWISS-PROT database: [P05305]
  • Domain organization of [EDN1_HUMAN] by SWISSPFAM
  • Domain found in 1EDP: [END ] by SMART
  • Other resources with information on 1EDP
  • Community annotation for 1EDP at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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