1EG2 Transferase date Feb 11, 2000
title Crystal Structure Of Rhodobacter Spheroides (N6 Adenosine) Methyltransferase (M.Rsri)
authors R.D.Scavetta, C.B.Thomas, M.A.Walsh, S.Szegedi, A.Joachimiak, R.I M.E.A.Churchill, Midwest Center For Structural Genomics (Mcs
compound source
Molecule: Modification Methylase Rsri
Chain: A
Synonym: Adenine-Specific Methyltransferase Rsri, M.Rsri
Ec: 2.1.1.72
Engineered: Yes
Organism_scientific: Rhodobacter Sphaeroides
Organism_taxid: 1063
Expression_system_common: T7 Expression System
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: C 2 2 21
R_factor 0.214 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
70.420 130.253 67.284 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.75 Å
ligand MTA enzyme Transferase E.C.2.1.1.72 BRENDA
related structures by homologous chain: 1NW6
Gene
Ontology
ChainFunctionProcessComponent
A
  • site-specific DNA-methyltran...


  • Primary referenceStructure of RsrI methyltransferase, a member of the N6-adenine beta class of DNA methyltransferases., Scavetta RD, Thomas CB, Walsh MA, Szegedi S, Joachimiak A, Gumport RI, Churchill ME, Nucleic Acids Res 2000 Oct 15;28(20):3950-61. PMID:11024175
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (1eg2.pdb1.gz) 50 Kb
  • Biological Unit Coordinates (1eg2.pdb2.gz) 99 Kb
  • LPC: Ligand-Protein Contacts for 1EG2
  • CSU: Contacts of Structural Units for 1EG2
  • Likely Quarternary Molecular Structure file(s) for 1EG2
  • Structure Factors (360 Kb)
  • Retrieve 1EG2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EG2 from S2C, [Save to disk]
  • Re-refined 1eg2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1EG2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EG2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EG2, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1eg2a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1eg2] [1eg2_A]
  • SWISS-PROT database: [P14751]
  • Domain organization of [MTR1_RHOSH] by SWISSPFAM
  • Other resources with information on 1EG2
  • Community annotation for 1EG2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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