1EH6 Transferase date Feb 18, 2000
title Human O6-Alkylguanine-Dna Alkyltransferase
authors D.S.Daniels, J.A.Tainer
compound source
Molecule: O6-Alkylguanine-Dna Alkyltransferase
Chain: A
Synonym: Agt, O6-Methylguanine-Dna Methyltransferase, Mgmt
Ec: 2.1.1.63
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 31 2 1
R_factor 0.197 R_Free 0.218
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.283 71.283 73.611 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand ZN enzyme Transferase E.C.2.1.1.63 BRENDA
related structures by homologous chain: 1EH7, 1QNT
Gene
Ontology
ChainFunctionProcessComponent
A
  • DNA-methyltransferase activi...


  • Primary referenceActive and alkylated human AGT structures: a novel zinc site, inhibitor and extrahelical base binding., Daniels DS, Mol CD, Arvai AS, Kanugula S, Pegg AE, Tainer JA, EMBO J 2000 Apr 3;19(7):1719-30. PMID:10747039
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (1eh6.pdb1.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 1EH6
  • CSU: Contacts of Structural Units for 1EH6
  • Likely Quarternary Molecular Structure file(s) for 1EH6
  • Retrieve 1EH6 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EH6 from S2C, [Save to disk]
  • View 1EH6 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EH6
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1EH6, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1eh6a2, region A:5-91 [Jmol] [rasmolscript] [script source]
        - Domain d1eh6a1, region A:92-181 [Jmol] [rasmolscript] [script source]
  • Fold representative 1eh6 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1eh6_A] [1eh6]
  • SWISS-PROT database: [P16455]
  • Domain organization of [MGMT_HUMAN] by SWISSPFAM
  • Other resources with information on 1EH6
  • Community annotation for 1EH6 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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