1EJ1	Translation	date	Feb 29, 2000
title	Cocrystal Structure Of The Messenger Rna 5' Cap-Binding Prot (Eif4e) Bound To 7-Methyl-Gdp
authors	J.Marcotrigiano, A.C.Gingras, N.Sonenberg, S.K.Burley
compound		source
Molecule: Eukaryotic Translation Initiation Factor 4e Chain: A, B Fragment: Residues 28-217 Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet3b
symmetry	Space Group: P 21 21 21	R_factor 0.209 R_Free 0.235
crystal cell	length a length b length c angle alpha angle beta angle gamma 69.600 75.400 76.600 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	M7G	enzyme
related structures	by homologous chain: 1EJH, 1WKW
Gene Ontology	Chain Function Process Component A, B
Primary reference	Cocrystal structure of the messenger RNA 5' cap-binding protein (eIF4E) bound to 7-methyl-GDP., Marcotrigiano J, Gingras AC, Sonenberg N, Burley SK, Cell 1997 Jun 13;89(6):951-61. PMID:9200613

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (67 Kb) [Save to disk] Biological Unit Coordinates (1ej1.pdb1.gz) 32 Kb Biological Unit Coordinates (1ej1.pdb2.gz) 33 Kb LPC: Ligand-Protein Contacts for 1EJ1 CSU: Contacts of Structural Units for 1EJ1 Likely Quarternary Molecular Structure file(s) for 1EJ1 Structure Factors (149 Kb) Retrieve 1EJ1 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1EJ1 from S2C, [Save to disk] Re-refined 1ej1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1EJ1 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1EJ1

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1EJ1, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1ej1a_, region A [Jmol] [rasmolscript] [script source]     - Domain d1ej1b_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ej1] [1ej1_A] [1ej1_B] SWISS-PROT database: [P63073] Domain organization of [IF4E_MOUSE] by SWISSPFAM

Other resources with information on 1EJ1

Community annotation for 1EJ1 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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