1EJ2 Transferase date Feb 29, 2000
title Crystal Structure Of Methanobacterium Thermoautotrophicum Ni Mononucleotide Adenylyltransferase With Bound Nad+
authors V.Saridakis, D.Christendat, M.S.Kimber, A.M.Edwards, E.F.Pai, Mid Center For Structural Genomics (Mcsg), Northeast Structural Consortium (Nesg)
compound source
Molecule: Nicotinamide Mononucleotide Adenylyltransferase
Chain: A
Ec: 2.7.7.1
Engineered: Yes
Organism_scientific: Methanothermobacter Thermautotrophicus
Organism_taxid: 145262
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 63 2 2
R_factor 0.211 R_Free 0.241
crystal
cell
length a length b length c angle alpha angle beta angle gamma
89.084 89.084 109.926 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.90 Å
ligand NA, NAD, SO4 enzyme Transferase E.C.2.7.7.1 BRENDA
note 1EJ2 is a representative structure
related structures by homologous chain: 1M8G
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInsights into ligand binding and catalysis of a central step in NAD+ synthesis: structures of Methanobacterium thermoautotrophicum NMN adenylyltransferase complexes., Saridakis V, Christendat D, Kimber MS, Dharamsi A, Edwards AM, Pai EF, J Biol Chem 2001 Mar 9;276(10):7225-32. PMID:11063748
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (36 Kb) [Save to disk]
  • Biological Unit Coordinates (1ej2.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (1ej2.pdb2.gz) 177 Kb
  • LPC: Ligand-Protein Contacts for 1EJ2
  • CSU: Contacts of Structural Units for 1EJ2
  • Likely Quarternary Molecular Structure file(s) for 1EJ2
  • Retrieve 1EJ2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EJ2 from S2C, [Save to disk]
  • View 1EJ2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EJ2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EJ2, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ej2a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ej2] [1ej2_A]
  • SWISS-PROT database: [O26253]
  • Domain organization of [NADM_METTH] by SWISSPFAM
  • Other resources with information on 1EJ2
  • Community annotation for 1EJ2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science