1EJD Crystal structure of unliganded mura (type1) date
authors Eschenburg, S., Schonbrunn, E.
compound source
symmetry
R_factor
R_Free 0.2070000
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.55
ligand HAI, IAS, PO4 enzyme
note 1EJD is a representative structure
related structures by homologous chain: 1EYN
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceComparative X-ray analysis of the un-liganded fosfomycin-target murA., Eschenburg S, Schonbrunn E, Proteins 2000 Aug 1;40(2):290-8. PMID:10842342
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk]
  • Biological Unit Coordinates (1ejd.pdb1.gz) 79 Kb
  • Biological Unit Coordinates (1ejd.pdb2.gz) 78 Kb
  • Biological Unit Coordinates (1ejd.pdb3.gz) 301 Kb
  • Biological Unit Coordinates (1ejd.pdb4.gz) 153 Kb
  • Biological Unit Coordinates (1ejd.pdb5.gz) 152 Kb
  • LPC: Ligand-Protein Contacts for 1EJD
  • CSU: Contacts of Structural Units for 1EJD
  • Likely Quarternary Molecular Structure file(s) for 1EJD
  • Structure Factors (1104 Kb)
  • Retrieve 1EJD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EJD from S2C, [Save to disk]
  • Re-refined 1ejd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1EJD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EJD
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EJD, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ejda_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ejdb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ejd_B] [1ejd_A] [1ejd]
  • SWISS-PROT database: [P33038]
  • Domain organization of [MURA_ENTCL] by SWISSPFAM
  • Other resources with information on 1EJD
  • Community annotation for 1EJD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1EJD from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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