1EJE Ligand Binding Protein date Mar 02, 2000
title Crystal Structure Of An Fmn-Binding Protein
authors D.Christendat, V.Saridakis, A.Bochkarev, C.Arrowsmith, A.M.Edwar Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Fmn-Binding Protein
Chain: A
Engineered: Yes
Organism_scientific: Methanothermobacter Thermautotrophicus
Organism_taxid: 145262
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pet15b
symmetry Space Group: P 41 21 2
R_factor 0.225 R_Free 0.279
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.650 94.650 45.400 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand FMN, NI, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural proteomics of an archaeon., Christendat D, Yee A, Dharamsi A, Kluger Y, Savchenko A, Cort JR, Booth V, Mackereth CD, Saridakis V, Ekiel I, Kozlov G, Maxwell KL, Wu N, McIntosh LP, Gehring K, Kennedy MA, Davidson AR, Pai EF, Gerstein M, Edwards AM, Arrowsmith CH, Nat Struct Biol 2000 Oct;7(10):903-9. PMID:11017201
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (37 Kb) [Save to disk]
  • Biological Unit Coordinates (1eje.pdb1.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 1EJE
  • CSU: Contacts of Structural Units for 1EJE
  • Likely Quarternary Molecular Structure file(s) for 1EJE
  • Retrieve 1EJE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EJE from S2C, [Save to disk]
  • View 1EJE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EJE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EJE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ejea_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1eje] [1eje_A]
  • SWISS-PROT database: [O26255]
  • Domain organization of [P152_METTH] by SWISSPFAM
  • Domain found in 1EJE: [Flavin_Reduct ] by SMART
  • Other resources with information on 1EJE
  • Community annotation for 1EJE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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