1EQX Ligase date Apr 06, 2000
title Solution Structure Determination And Mutational Analysis Of Papillomavirus E6-Interacting Peptide Of E6ap
authors X.Be, Y.Hong, E.J.Androphy, J.J.Chen, J.D.Baleja
compound source
Molecule: Papillomavirus E6-Associated Protein
Chain: A
Fragment: E6-Interacting Peptide
Ec: 6.3.2.-
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
methodSolution NMR
ligand
enzyme Ligase E.C.6.3.2 BRENDA
Primary referenceSolution structure determination and mutational analysis of the papillomavirus E6 interacting peptide of E6AP., Be X, Hong Y, Wei J, Androphy EJ, Chen JJ, Baleja JD, Biochemistry 2001 Feb 6;40(5):1293-9. PMID:11170455
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (1eqx.pdb1.gz) 5 Kb
  • CSU: Contacts of Structural Units for 1EQX
  • Original NMR restraints for 1EQX from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1EQX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EQX from S2C, [Save to disk]
    • View 1EQX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1EQX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EQX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1eqxa_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1eqx_A] [1eqx]
  • SWISS-PROT database: [Q05086]
  • Domain organization of [UBE3A_HUMAN] by SWISSPFAM
    • Other resources with information on 1EQX
  • Community annotation for 1EQX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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