1ES0	Immune System	date	Apr 07, 2000
title	Crystal Structure Of The Murine Class II Allele I-A(G7) Comp The Glutamic Acid Decarboxylase (Gad65) Peptide 207-220
authors	A.L.Corper, L.Teyton, I.A.Wilson
compound		source
Molecule: H-2 Class II Histocompatibility Antigen Chain: A Fragment: Alpha Chain Engineered: Yes		Organism_scientific: Mus Musculus Organism_common: Mouse Organism_taxid: 10090 Expression_system_common: Insect
Molecule: 65 Kd Glutamic Acid Decarboxylase+H-2 Class II Histocompatibility Antigen; Chain: B Fragment: Peptide (Residues 222-235) + Beta Chain Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system_common: Insect
symmetry	Space Group: C 2 2 21	R_factor 0.210 R_Free 0.258
crystal cell	length a length b length c angle alpha angle beta angle gamma 95.149 110.123 96.084 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
related structures	by homologous chain: 1FYT, 1HXY, 1IAO, 1LNU
Gene Ontology	Chain Function Process Component A B
Primary reference	A structural framework for deciphering the link between I-Ag7 and autoimmune diabetes., Corper AL, Stratmann T, Apostolopoulos V, Scott CA, Garcia KC, Kang AS, Wilson IA, Teyton L, Science 2000 Apr 21;288(5465):505-11. PMID:10775108

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk] Biological Unit Coordinates (1es0.pdb1.gz) 59 Kb CSU: Contacts of Structural Units for 1ES0 Likely Quarternary Molecular Structure file(s) for 1ES0 Structure Factors (181 Kb) Retrieve 1ES0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1ES0 from S2C, [Save to disk] Re-refined 1es0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1ES0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1ES0

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 1ES0, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1es0a2, region A:1B-82 [Jmol] [rasmolscript] [script source]     - Domain d1es0a1, region A:83-180 [Jmol] [rasmolscript] [script source]     - Domain d1es0b2, region B:5-93 [Jmol] [rasmolscript] [script source]     - Domain d1es0b1, region B:94-189 [Jmol] [rasmolscript] [script source] Fold representative 1es0 from FSSP and Dali (Families of Structurally Similar Proteins) Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1es0_B] [1es0] [1es0_A] SWISS-PROT database: [Q05329] [P04228] Domain organization of [DCE2_HUMAN] [HA2D_MOUSE] by SWISSPFAM Domains found in 1ES0: [IGc1] [MHC_II_alpha] [MHC_II_beta ] by SMART

Other resources with information on 1ES0

Community annotation for 1ES0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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