1ESD Hydrolase (Serine Esterase) date Oct 07, 1994
title The Molecular Mechanism Of Enantiorecognition By Esterases
authors Y.Wei, J.L.Schottel, U.Derewenda, L.Swenson, S.Patkar, Z.S.Derewenda
compound source
Molecule: Esterase
Chain: A
Organism_scientific: Streptomyces Scabiei
Organism_taxid: 1930
symmetry Space Group: C 1 2 1
length a length b length c angle alpha angle beta angle gamma
131.133 48.596 70.353 90.00 118.03 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand VXA enzyme
related structures by homologous chain: 1ESC, 1ESE

Primary referenceA novel variant of the catalytic triad in the Streptomyces scabies esterase., Wei Y, Schottel JL, Derewenda U, Swenson L, Patkar S, Derewenda ZS, Nat Struct Biol. 1995 Mar;2(3):218-23. PMID:7773790
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (1esd.pdb1.gz) 51 Kb
  • LPC: Ligand-Protein Contacts for 1ESD
  • CSU: Contacts of Structural Units for 1ESD
  • Likely Quarternary Molecular Structure file(s) for 1ESD
  • Retrieve 1ESD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ESD from S2C, [Save to disk]
  • View 1ESD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ESD
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1ESD, from MSDmotif at EBI
  • Genome occurence of 1ESD's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1esd__, region [Jmol] [rasmolscript] [script source]
  • Fold representative 1esd from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1esd_A] [1esd]
  • SWISS-PROT database: [P22266]
  • Domain organization of [ESTA_STRSC] by SWISSPFAM
  • Other resources with information on 1ESD
  • Community annotation for 1ESD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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