1ESL Cell Adhesion Protein date Jun 03, 1994
title Insight Into E-Selectin(Slash)Ligand Interaction From The Cr Structure And Mutagenesis Of The Lec(Slash)Egf Domains
authors B.J.Graves, R.L.Crowther
compound source
Molecule: Human E-Selectin
Chain: A
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Cho
symmetry Space Group: P 21 21 21
R_factor 0.164 R_Free 0.239
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.380 73.530 77.600 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand CA, CL enzyme
related structures by homologous chain: 1G1Q, 1G1S
Primary referenceInsight into E-selectin/ligand interaction from the crystal structure and mutagenesis of the lec/EGF domains., Graves BJ, Crowther RL, Chandran C, Rumberger JM, Li S, Huang KS, Presky DH, Familletti PC, Wolitzky BA, Burns DK, Nature 1994 Feb 10;367(6463):532-8. PMID:7509040
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (1esl.pdb1.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 1ESL
  • CSU: Contacts of Structural Units for 1ESL
  • Likely Quarternary Molecular Structure file(s) for 1ESL
  • Retrieve 1ESL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ESL from S2C, [Save to disk]
    • View 1ESL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ESL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ESL, from MSDmotif at EBI
  • Genome occurence of 1ESL's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1esl_1, region 1-118 [Jmol] [rasmolscript] [script source]
        - Domain d1esl_2, region 119-157 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1esl_A] [1esl]
  • SWISS-PROT database: [P16581]
  • Domain organization of [LYAM2_HUMAN] by SWISSPFAM
  • Domains found in 1ESL: [CLECT] [EGF ] by SMART
    • Other resources with information on 1ESL
  • Community annotation for 1ESL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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