1ESX Viral Protein date Apr 11, 2000
title 1h, 15n And 13c Structure Of The Hiv-1 Regulatory Protein Vp Comparison With The N-And C-Terminal Domain Structure, (1-5 (52-96)Vpr
authors K.Wecker, N.Morellet, S.Bouaziz, B.Roques
compound source
Molecule: Vpr Protein
Chain: A
Synonym: Viral Protein Of Regulation
Engineered: Yes
Synthetic: Yes
Other_details: This Sequence Has Been Obtained By Solid Pha Synthesis. The Sequence Of This Protein Is Naturally Found Immunodeficiency Virus Type 1 (Hiv-1).
methodSolution NMR
related structures by homologous chain: 1CEU, 1X9V
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structure of the HIV-1 regulatory protein Vpr in H2O/trifluoroethanol. Comparison with the Vpr N-terminal (1-51) and C-terminal (52-96) domains., Wecker K, Morellet N, Bouaziz S, Roques BP, Eur J Biochem 2002 Aug;269(15):3779-88. PMID:12153575
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk]
  • Biological Unit Coordinates (1esx.pdb1.gz) 28 Kb
  • CSU: Contacts of Structural Units for 1ESX
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1ESX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ESX from S2C, [Save to disk]
  • View 1ESX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ESX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ESX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1esxa_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1esx] [1esx_A]
  • SWISS-PROT database: [Q73369]
  • Domain organization of [VPR_HV1B9] by SWISSPFAM
  • Other resources with information on 1ESX
  • Community annotation for 1ESX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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