1ETF Viral Protein Rna date Aug 28, 1996
title Rev Response Element (Rre) Rna Complexed With Rev Peptide, N Minimized Average Structure
authors J.L.Battiste, H.Mao, N.S.Rao, R.Tan, D.R.Muhandiram, L.E.Kay, A.D. J.R.Willamson
compound source
Molecule: Rev Response Element Rna
Chain: A
Engineered: Yes
 Synthetic: Yes

Molecule: Rev Peptide
Chain: B
Engineered: Yes
Organism_scientific: Human Immunodeficiency Virus 1
Organism_taxid: 11676
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
Primary referenceAlpha helix-RNA major groove recognition in an HIV-1 rev peptide-RRE RNA complex., Battiste JL, Mao H, Rao NS, Tan R, Muhandiram DR, Kay LE, Frankel AD, Williamson JR, Science 1996 Sep 13;273(5281):1547-51. PMID:8703216
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk]
  • Biological Unit Coordinates (1etf.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 1ETF
  • Original NMR restraints for 1ETF from PDB
  • Retrieve 1ETF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ETF from S2C, [Save to disk]
    • View 1ETF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ETF
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ETF, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1etfb_, region B [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1etf] [1etf_B] [1etf_A]
  • SWISS-PROT database: [P05866]
  • Domain organization of [REV_HV1W2] by SWISSPFAM
    • Other resources with information on 1ETF
  • Community annotation for 1ETF at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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