1EXB Metal Transport date May 02, 2000
title Structure Of The Cytoplasmic Beta Subunit-T1 Assembly Of Vol Dependent K Channels
authors J.M.Gulbis, M.Zhou, S.Mann, R.Mackinnon
compound source
Molecule: Kv Beta2 Protein
Chain: A
Fragment: Beta Subunit, Residues 36-367
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Organ: Brain
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
Expression_system_plasmid: Pfastbac1

Molecule: Potassium Channel Kv1.1
Chain: E
Fragment: T1 Domain, Residues 27-129
Engineered: Yes

Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Organ: Brain
Expression_system: Unidentified Baculovirus
Expression_system_taxid: 10469
Expression_system_plasmid: Pacg2t
symmetry Space Group: P 4 21 2
R_factor 0.215 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.725 100.725 110.901 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand NDP enzyme
related structures by homologous chain: 1A68, 1QDW, 1QRQ, 1ZSX
Gene
Ontology
ChainFunctionProcessComponent
A
  • voltage-gated ion channel ac...
  • voltage-gated potassium chan...


  • E


    Primary referenceStructure of the cytoplasmic beta subunit-T1 assembly of voltage-dependent K+ channels., Gulbis JM, Zhou M, Mann S, MacKinnon R, Science 2000 Jul 7;289(5476):123-7. PMID:10884227
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (1exb.pdb1.gz) 281 Kb
  • LPC: Ligand-Protein Contacts for 1EXB
  • CSU: Contacts of Structural Units for 1EXB
  • Likely Quarternary Molecular Structure file(s) for 1EXB
  • Structure Factors (307 Kb)
  • Retrieve 1EXB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1EXB from S2C, [Save to disk]
  • Re-refined 1exb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1EXB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1EXB
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1EXB, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1exba_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1exbe_, region E [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1exb_A] [1exb] [1exb_E]
  • SWISS-PROT database: [P62483] [P10499]
  • Domain organization of [KCAB2_RAT] [KCNA1_RAT] by SWISSPFAM
  • Domain found in 1EXB: [BTB ] by SMART
  • Other resources with information on 1EXB
  • Community annotation for 1EXB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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