1F05 Transferase date May 14, 2000
title Crystal Structure Of Human Transaldolase
authors G.Schneider, S.Thorell
compound source
Molecule: Transaldolase
Chain: A, B
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell: Myelomonocytic Leukemia Cells
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex-2t
symmetry Space Group: P 1 21 1
R_factor 0.225 R_Free 0.258
length a length b length c angle alpha angle beta angle gamma
45.570 113.570 69.190 90.00 101.37 90.00
method X-Ray Diffractionresolution 2.45 Å
enzyme Transferase E.C. BRENDA
A, B

Primary referenceThe three-dimensional structure of human transaldolase., Thorell S, Gergely P Jr, Banki K, Perl A, Schneider G, FEBS Lett 2000 Jun 23;475(3):205-8. PMID:10869557
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (107 Kb) [Save to disk]
  • Biological Unit Coordinates (1f05.pdb1.gz) 103 Kb
  • CSU: Contacts of Structural Units for 1F05
  • Likely Quarternary Molecular Structure file(s) for 1F05
  • Structure Factors (164 Kb)
  • Retrieve 1F05 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1F05 from S2C, [Save to disk]
  • Re-refined 1f05 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1F05 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1F05
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1F05, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f05a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1f05b_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1f05 from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1f05_B] [1f05_A] [1f05]
  • SWISS-PROT database: [P37837]
  • Domain organization of [TALDO_HUMAN] by SWISSPFAM
  • Other resources with information on 1F05
  • Community annotation for 1F05 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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