1F0U Hydrolase date May 17, 2000
title Bovine Trypsin Complexed With Rpr128515
authors S.Maignan, J.P.Guilloteau, S.Pouzieux, Y.M.Choi-Sledeski, M.R.Becker, S.I.Klein, W.R.Ewing, H.W.Pauls, A.P.Spada, V.Mikol
compound source
Molecule: Trypsin
Chain: A
Ec: 3.4.21.4
Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
symmetry Space Group: P 21 21 21
R_factor 0.172 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.730 63.890 69.170 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand CA, RPR, SO4 BindingDB enzyme Hydrolase E.C.3.4.21.4 BRENDA
related structures by homologous chain: 1K1P, 1Z7K
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of human factor Xa complexed with potent inhibitors., Maignan S, Guilloteau JP, Pouzieux S, Choi-Sledeski YM, Becker MR, Klein SI, Ewing WR, Pauls HW, Spada AP, Mikol V, J Med Chem 2000 Aug 24;43(17):3226-32. PMID:10966741
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk]
  • Biological Unit Coordinates (1f0u.pdb1.gz) 37 Kb
  • LPC: Ligand-Protein Contacts for 1F0U
  • CSU: Contacts of Structural Units for 1F0U
  • Likely Quarternary Molecular Structure file(s) for 1F0U
  • Structure Factors (190 Kb)
  • Retrieve 1F0U in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1F0U from S2C, [Save to disk]
  • Re-refined 1f0u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1F0U in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1F0U
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1F0U, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1f0ua_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1f0u from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1f0u_A] [1f0u]
  • SWISS-PROT database: [P00760]
  • Domain organization of [TRY1_BOVIN] by SWISSPFAM
  • Domain found in 1F0U: [Tryp_SPc ] by SMART
  • Other resources with information on 1F0U
  • Community annotation for 1F0U at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014
    Bioinformatics Unit
    Weizmann Institute of Science