1F5W	Viral Protein Receptor	date	Jun 18, 2000
title	Dimeric Structure Of The Coxsackie Virus And Adenovirus Rece Domain
authors	M.J.Van Raaij, E.Chouin, H.Van Der Zandt, J.M.Bergelson, S.Cusac
compound		source
Molecule: Coxsackie Virus And Adenovirus Receptor Chain: A, B Fragment: D1 Domain Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_plasmid: Pab3 Other_details: Hela Cell Cdna Library
symmetry	Space Group: P 43 21 2	R_factor 0.158 R_Free 0.193
crystal cell	length a length b length c angle alpha angle beta angle gamma 68.337 68.337 146.356 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	SO4	enzyme
related structures	by homologous chain: 1EAJ, 1KAC
Primary reference	Dimeric structure of the coxsackievirus and adenovirus receptor D1 domain at 1.7 A resolution., van Raaij MJ, Chouin E, van der Zandt H, Bergelson JM, Cusack S, Structure Fold Des 2000 Nov 15;8(11):1147-55. PMID:11080637

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk] Biological Unit Coordinates (1f5w.pdb1.gz) 86 Kb Biological Unit Coordinates (1f5w.pdb2.gz) 87 Kb LPC: Ligand-Protein Contacts for 1F5W CSU: Contacts of Structural Units for 1F5W Likely Quarternary Molecular Structure file(s) for 1F5W Structure Factors (299 Kb) Retrieve 1F5W in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1F5W from S2C, [Save to disk] Re-refined 1f5w structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1F5W in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1F5W

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1F5W, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1f5wa_, region A [Jmol] [rasmolscript] [script source]     - Domain d1f5wb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1f5w_A] [1f5w] [1f5w_B] SWISS-PROT database: [P78310] Domain organization of [CXAR_HUMAN] by SWISSPFAM Domain found in 1F5W: [IG ] by SMART

Other resources with information on 1F5W

Community annotation for 1F5W at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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