1FBT Hydrolase date Mar 08, 1996
title The Bisphosphatase Domain Of The Bifunctional Rat Liver 6- Phosphofructo-2-Kinasefructose-2,6-Bisphosphatase
authors Y.H.Lee, C.Ogata, J.W.Pflugrath, D.G.Levitt, R.Sarma, L.J.Banaszak, S.J.Pilkis
compound source
Molecule: Fructose-2,6-Bisphosphatase
Chain: A, B
Synonym: D-Fructose-2,6-Bisphosphate 2-Phosphohydrolase
Ec: 3.1.3.46
Engineered: Yes
Mutation: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Organ: Liver
Gene: A Coding Region Which Covers
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Dl41 De3
Expression_system_plasmid: Pet3a
Expression_system_gene: A Coding Region Which Covers Fructose-2,6-Bisphosphatase Domain (Residues 251-440) Of The Rat Liver 6-Pf-2-Kfru-2,6-P2ase (Residues 1-470)
symmetry Space Group: P 1 21 1
R_factor 0.218 R_Free 0.278
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.400 56.600 93.700 90.00 94.40 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand MSE, PO4 enzyme Hydrolase E.C.3.1.3.46 BRENDA
related structures by homologous chain: 1BIF, 1C80
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of the rat liver fructose-2,6-bisphosphatase based on selenomethionine multiwavelength anomalous dispersion phases., Lee YH, Ogata C, Pflugrath JW, Levitt DG, Sarma R, Banaszak LJ, Pilkis SJ, Biochemistry 1996 May 14;35(19):6010-9. PMID:8634242
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (72 Kb) [Save to disk]
  • Biological Unit Coordinates (1fbt.pdb1.gz) 67 Kb
  • LPC: Ligand-Protein Contacts for 1FBT
  • CSU: Contacts of Structural Units for 1FBT
  • Likely Quarternary Molecular Structure file(s) for 1FBT
  • Retrieve 1FBT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FBT from S2C, [Save to disk]
  • View 1FBT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FBT
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FBT, from MSDmotif at EBI
  • Genome occurence of 1FBT's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fbta_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1fbtb_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fbt] [1fbt_B] [1fbt_A]
  • SWISS-PROT database: [P07953]
  • Domain organization of [F261_RAT] by SWISSPFAM
  • Domain found in 1FBT: [PGAM ] by SMART
  • Other resources with information on 1FBT
  • Community annotation for 1FBT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1FBT from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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