1FD4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand SO4 enzyme
related structures by homologous chain: 1FD3, 1FQQ
Gene
Ontology
ChainFunctionProcessComponent
A, P, I, M, K, O, J, D, C, B, L, F, H, N, E, G
  • chemoattractant activity


    • Primary referenceThe structure of human beta-defensin-2 shows evidence of higher order oligomerization., Hoover DM, Rajashankar KR, Blumenthal R, Puri A, Oppenheim JJ, Chertov O, Lubkowski J, J Biol Chem 2000 Oct 20;275(42):32911-8. PMID:10906336
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk]
  • Biological Unit Coordinates (1fd4.pdb1.gz) 17 Kb
  • Biological Unit Coordinates (1fd4.pdb2.gz) 15 Kb
  • Biological Unit Coordinates (1fd4.pdb3.gz) 17 Kb
  • Biological Unit Coordinates (1fd4.pdb4.gz) 16 Kb
  • Biological Unit Coordinates (1fd4.pdb5.gz) 17 Kb
  • Biological Unit Coordinates (1fd4.pdb6.gz) 17 Kb
  • Biological Unit Coordinates (1fd4.pdb7.gz) 17 Kb
  • Biological Unit Coordinates (1fd4.pdb8.gz) 16 Kb
  • LPC: Ligand-Protein Contacts for 1FD4
  • CSU: Contacts of Structural Units for 1FD4
  • Likely Quarternary Molecular Structure file(s) for 1FD4
  • Structure Factors (427 Kb)
  • Retrieve 1FD4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FD4 from S2C, [Save to disk]
  • Re-refined 1fd4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1FD4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fd4] [1fd4_A] [1fd4_B] [1fd4_C] [1fd4_D] [1fd4_E] [1fd4_F] [1fd4_G] [1fd4_H] [1fd4_I] [1fd4_J] [1fd4_K] [1fd4_L] [1fd4_M] [1fd4_N] [1fd4_O] [1fd4_P]
  • SWISS-PROT database: [O15263]
  • Belongs to the pore-forming -defensin (-defensin) family according to TCDB.
  • Domain found in 1FD4: [DEFSN ] by SMART

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