1FGI Protein Kinase date Mar 22, 1997
title Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With Su5402 Inhibitor
authors M.Mohammadi, J.Schlessinger, S.R.Hubbard
compound source
Molecule: Fgf Receptor 1
Chain: A, B
Fragment: Tyrosine Kinase Domain
Synonym: Fgfr1k
Ec: 2.7.1.112
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Sf9
Organelle: Cytoplasm
Cellular_location: Cytoplasm
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_cell_line: Sf9
Expression_system_vector: Baculovirus
symmetry Space Group: C 1 2 1
R_factor 0.190 R_Free 0.270
crystal
cell
length a length b length c angle alpha angle beta angle gamma
208.490 57.790 65.530 90.00 107.68 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand SU1 BindingDB enzyme Transferase E.C.2.7.1.112 BRENDA
related structures by homologous chain: 1OEC, 2FGI
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructures of the tyrosine kinase domain of fibroblast growth factor receptor in complex with inhibitors., Mohammadi M, McMahon G, Sun L, Tang C, Hirth P, Yeh BK, Hubbard SR, Schlessinger J, Science 1997 May 9;276(5314):955-60. PMID:9139660
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (98 Kb) [Save to disk]
  • Biological Unit Coordinates (1fgi.pdb1.gz) 49 Kb
  • Biological Unit Coordinates (1fgi.pdb2.gz) 47 Kb
  • LPC: Ligand-Protein Contacts for 1FGI
  • CSU: Contacts of Structural Units for 1FGI
  • Likely Quarternary Molecular Structure file(s) for 1FGI
  • Retrieve 1FGI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FGI from S2C, [Save to disk]
  • View 1FGI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FGI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1FGI, from MSDmotif at EBI
  • Genome occurence of 1FGI's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fgia_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1fgib_, region B [Jmol] [rasmolscript] [script source]
  • Fold representative 1fgi from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fgi_A] [1fgi_B] [1fgi]
  • SWISS-PROT database: [P11362]
  • Domain organization of [FGFR1_HUMAN] by SWISSPFAM
  • Domain found in 1FGI: [TyrKc ] by SMART
  • Alignments of the sequence of 1FGI with the sequences similar proteins can be viewed for 1FGI's classification [FGFR1_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [FGFR1_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1FGI
  • Community annotation for 1FGI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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