1FIN Complex (Transferase Cyclin) date Jul 14, 1996
title Cyclin A-Cyclin-Dependent Kinase 2 Complex
authors P.D.Jeffrey, A.A.Russo, N.P.Pavletich
compound source
Molecule: Cyclin-Dependent Kinase 2
Chain: A, C
Synonym: Cdk2
Ec: 2.7.1.-
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Sf9
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_vector: Baculovirus Vector
Expression_system_plasmid: Pet3a

Molecule: Cyclin A
Chain: B, D
Fragment: Residues 173 - 432
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Cell_line: Sf9
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pet3a
Other_details: The Fragment Used In The Crystallization Was Produced By The Cleavage Of Full-Length Cyclin A By Subtilisin
symmetry Space Group: P 62 2 2
R_factor 0.208 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
185.100 185.100 214.400 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.30 Å
ligand ATP enzyme Transferase E.C.2.7.1 BRENDA
related structures by homologous chain: 1OKV, 1PKD, 1PXJ
Gene
Ontology
ChainFunctionProcessComponent
A, C


Primary referenceMechanism of CDK activation revealed by the structure of a cyclinA-CDK2 complex., Jeffrey PD, Russo AA, Polyak K, Gibbs E, Hurwitz J, Massague J, Pavletich NP, Nature 1995 Jul 27;376(6538):313-20. PMID:7630397
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (195 Kb) [Save to disk]
  • Biological Unit Coordinates (1fin.pdb1.gz) 97 Kb
  • Biological Unit Coordinates (1fin.pdb2.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 1FIN
  • CSU: Contacts of Structural Units for 1FIN
  • Likely Quarternary Molecular Structure file(s) for 1FIN
  • Retrieve 1FIN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FIN from S2C, [Save to disk]
  • View 1FIN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FIN
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1FIN, from MSDmotif at EBI
  • Genome occurence of 1FIN's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fina_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1finb1, region B:173-309 [Jmol] [rasmolscript] [script source]
        - Domain d1finb2, region B:310-432 [Jmol] [rasmolscript] [script source]
        - Domain d1finc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1find1, region D:173-309 [Jmol] [rasmolscript] [script source]
        - Domain d1find2, region D:310-432 [Jmol] [rasmolscript] [script source]
  • Fold representative 1fin from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fin] [1fin_B] [1fin_A] [1fin_D] [1fin_C]
  • SWISS-PROT database: [P20248] [P24941]
  • Domain organization of [CCNA2_HUMAN] [CDK2_HUMAN] by SWISSPFAM
  • Domains found in 1FIN: [CYCLIN] [Cyclin_C] [S_TKc ] by SMART
  • Other resources with information on 1FIN
  • Community annotation for 1FIN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1FIN from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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