1FL9 Structural Genomics, Unknown Function date Aug 13, 2000
title The Yjee Protein
authors A.Teplyakov, G.L.Gilliland, Structure 2 Function Project (S2f)
compound source
Molecule: Hypothetical Protein Hi0065
Chain: A, B, C
Engineered: Yes
 Organism_scientific: Haemophilus Influenzae
Organism_taxid: 727
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 (De3)
Expression_system_plasmid: Plasmid T7-His Tag
symmetry Space Group: C 1 2 1
R_factor 0.220 R_Free 0.285
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.400 73.000 96.800 90.00 110.20 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand HG enzyme
related structures by homologous chain: 1HTW
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceCrystal structure of the YjeE protein from Haemophilus influenzae: a putative Atpase involved in cell wall synthesis., Teplyakov A, Obmolova G, Tordova M, Thanki N, Bonander N, Eisenstein E, Howard AJ, Gilliland GL, Proteins 2002 Aug 1;48(2):220-6. PMID:12112691
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk]
  • Biological Unit Coordinates (1fl9.pdb1.gz) 27 Kb
  • Biological Unit Coordinates (1fl9.pdb2.gz) 26 Kb
  • Biological Unit Coordinates (1fl9.pdb3.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 1FL9
  • CSU: Contacts of Structural Units for 1FL9
  • Likely Quarternary Molecular Structure file(s) for 1FL9
  • Retrieve 1FL9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FL9 from S2C, [Save to disk]
    • View 1FL9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FL9
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FL9, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fl9a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1fl9b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1fl9c_, region C [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fl9] [1fl9_B] [1fl9_C] [1fl9_A]
  • SWISS-PROT database: [P44492]
  • Domain organization of [Y065_HAEIN] by SWISSPFAM
    • Other resources with information on 1FL9
  • Community annotation for 1FL9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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