1FLI Transcription Dna date Sep 15, 1994
title Dna-Binding Domain Of Fli-1
authors H.Liang, X.Mao, E.T.Olejniczak, D.G.Nettesheim, L.Yu, R.P.Meadows, C.B.Thompson, S.W.Fesik
compound source
Molecule: Fli-1
Chain: A
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: T7
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: T7
Expression_system_plasmid: Pet3b
Expression_system_gene: T7
methodSolution NMR
related structures by homologous chain: 1R36, 2STT
Primary referenceSolution structure of the ets domain of Fli-1 when bound to DNA., Liang H, Mao X, Olejniczak ET, Nettesheim DG, Yu L, Meadows RP, Thompson CB, Fesik SW, Nat Struct Biol 1994 Dec;1(12):871-5. PMID:7773776
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (792 Kb) [Save to disk]
  • CSU: Contacts of Structural Units for 1FLI
  • Retrieve 1FLI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FLI from S2C, [Save to disk]
  • View 1FLI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FLI
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1FLI, from MSDmotif at EBI
  • Genome occurence of 1FLI's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1flia_, region A [Jmol] [rasmolscript] [script source]
  • Fold representative 1fli from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fli_A] [1fli]
  • SWISS-PROT database: [Q01543]
  • Domain organization of [FLI1_HUMAN] by SWISSPFAM
  • Domain found in 1FLI: [ETS ] by SMART
  • Alignments of the sequence of 1FLI with the sequences similar proteins can be viewed for 1FLI's classification [FLI1_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [FLI1_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1FLI
  • Community annotation for 1FLI at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1FLI from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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