1FNH Heparin And Integrin Binding date Jan 28, 1999
title Crystal Structure Of Heparin And Integrin Binding Segment Of Human Fibronectin
authors A.Sharma, J.Askari, M.Humphries, E.Y.Jones, D.I.Stuart
compound source
Molecule: Protein (Fibronectin)
Chain: A
Fragment: Heparin And Integrin Binding
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: I 2 2 2
R_factor 0.216 R_Free 0.295
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.580 86.290 142.800 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.80 Å
Primary referenceCrystal structure of a heparin- and integrin-binding segment of human fibronectin., Sharma A, Askari JA, Humphries MJ, Jones EY, Stuart DI, EMBO J 1999 Mar 15;18(6):1468-79. PMID:10075919
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (1fnh.pdb1.gz) 48 Kb
  • CSU: Contacts of Structural Units for 1FNH
  • Likely Quarternary Molecular Structure file(s) for 1FNH
  • Retrieve 1FNH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FNH from S2C, [Save to disk]
  • View 1FNH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FNH
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1FNH, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fnha3, region A:183-271 [Jmol] [rasmolscript] [script source]
        - Domain d1fnha1, region A:3-92 [Jmol] [rasmolscript] [script source]
        - Domain d1fnha2, region A:93-182 [Jmol] [rasmolscript] [script source]
  • Fold representative 1fnh from FSSP and Dali (Families of Structurally Similar Proteins)
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fnh] [1fnh_A]
  • SWISS-PROT database: [P02751]
  • Domain organization of [FINC_HUMAN] by SWISSPFAM
  • Domain found in 1FNH: [FN3 ] by SMART
  • Other resources with information on 1FNH
  • Community annotation for 1FNH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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