OCA Atlas for 1FT8

1FT8

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

note

1FT8 is a representative structure

Gene
Ontology

Chain	Function	Process	Component
D, B, C, E, A

Primary reference

The structure of the mRNA export factor TAP reveals a cis arrangement of a non-canonical RNP domain and an LRR domain., Liker E, Fernandez E, Izaurralde E, Conti E, EMBO J 2000 Nov 1;19(21):5587-98. PMID:11060011

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk]

Biological Unit Coordinates (1ft8.pdb1.gz) 39 Kb

Biological Unit Coordinates (1ft8.pdb2.gz) 28 Kb

Biological Unit Coordinates (1ft8.pdb3.gz) 39 Kb

Biological Unit Coordinates (1ft8.pdb4.gz) 28 Kb

Biological Unit Coordinates (1ft8.pdb5.gz) 8 Kb

CSU: Contacts of Structural Units for 1FT8

Likely Quarternary Molecular Structure file(s) for 1FT8

Structure Factors (320 Kb)

Retrieve 1FT8 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 1FT8 from S2C, [Save to disk]

Re-refined 1ft8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1FT8 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1ft8] [1ft8_A] [1ft8_B] [1ft8_C] [1ft8_D] [1ft8_E]

SWISS-PROT database: [Q9UBU9]

Belongs to the nuclear mrna exporter (mrna-e) family

according to TCDB.

Domain found in 1FT8: [LRRcap ] by SMART

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