1FUB Hormone Growth Factor date Sep 14, 2000
title First Protein Structure Determined From X-Ray Powder Diffrac
authors R.B.Von Dreele, P.W.Stephens, R.H.Blessing, G.D.Smith
compound source
Molecule: Insulin, A Chain
Chain: A, C
Fragment: A Chain Of T3r3 Variant
Engineered: Yes
Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Humans

Molecule: Insulin, B Chain
Chain: B, D
Fragment: B Chain Of T3r3 Variant
Engineered: Yes

Synthetic: Yes
Other_details: This Sequence Occurs Naturally In Humans
symmetry Space Group: H 3
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.968 80.968 37.591 90.00 90.00 120.00
method Powder Diffractionresolution
ligand CL, NA, ZN enzyme
Primary referenceThe first protein crystal structure determined from high-resolution X-ray powder diffraction data: a variant of T3R3 human insulin-zinc complex produced by grinding., Von Dreele RB, Stephens PW, Smith GD, Blessing RH, Acta Crystallogr D Biol Crystallogr 2000 Dec;56 Pt 12:1549-53. PMID:11092920
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (17 Kb) [Save to disk]
  • Biological Unit Coordinates (1fub.pdb1.gz) 15 Kb
  • Biological Unit Coordinates (1fub.pdb2.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 1FUB
  • CSU: Contacts of Structural Units for 1FUB
  • Likely Quarternary Molecular Structure file(s) for 1FUB
  • Structure Factors (84 Kb)
  • Retrieve 1FUB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FUB from S2C, [Save to disk]
  • View 1FUB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FUB
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 1FUB, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fub.1, region B:,A [Jmol] [rasmolscript] [script source]
        - Domain d1fub.2, region D:,C [Jmol] [rasmolscript] [script source]
  • Fold representative 1fub from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fub_A] [1fub_D] [1fub_B] [1fub] [1fub_C]
  • SWISS-PROT database: [P01308]
  • Domain organization of [INS_HUMAN] by SWISSPFAM
  • Domain found in 1FUB: [IlGF ] by SMART
  • Alignments of the sequence of 1FUB with the sequences similar proteins can be viewed for 1FUB's classification [INS_HUMAN] at ProtoMap. Click on "Neighbors List", then on the "See Alignments" button below the list.
  • A sequence distance tree ("phylogenetic tree") can be viewed for 1ACL's classification [INS_HUMAN] at ProtoMap. Click on the Cluster number.
  • Other resources with information on 1FUB
  • Community annotation for 1FUB at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1FUB from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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