1FZ7 Oxidoreductase date Oct 03, 2000
title Methane Monooxygenase Hydroxylase, Form III Soaked In 0.9 M Ethanol
authors D.A.Whittington, M.H.Sazinsky, S.J.Lippard
compound source
Molecule: Methane Monooxygenase Component A, Alpha Chain
Chain: A, B
Synonym: Hydroxylase Alpha Subunit
Ec: 1.14.13.25
Organism_scientific: Methylococcus Capsulatus
Organism_taxid: 414

Molecule: Methane Monooxygenase Component A, Beta Chain
Chain: C, D
Synonym: Hydroxylase Beta Subunit, Methane Monooxygenase A Beta Chain;
Ec: 1.14.13.25

Organism_scientific: Methylococcus Capsulatus
Organism_taxid: 414

Molecule: Methane Monooxygenase Component A, Gamma Chain
Chain: E, F
Synonym: Hydroxylase Gamma Subunit, Soluble Methane Monooxygenase Hydroxylase Component Gamma Subunit;
Ec: 1.14.13.25

Organism_scientific: Methylococcus Capsulatus
Organism_taxid: 414
symmetry Space Group: P 21 21 21
R_factor 0.214 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.400 172.370 221.130 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.96 Å
ligand CA, EOH, FE, FMT enzyme Oxidoreductase E.C.1.14.13.25 BRENDA
related structures by homologous chain: 1FZ1, 1MHY, 1XU5, 1XVF
Gene
Ontology
ChainFunctionProcessComponent
A, B


D, C


F, E


Primary referenceX-ray crystal structure of alcohol products bound at the active site of soluble methane monooxygenase hydroxylase., Whittington DA, Sazinsky MH, Lippard SJ, J Am Chem Soc 2001 Feb 28;123(8):1794-5. PMID:11456795
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (379 Kb) [Save to disk]
  • Biological Unit Coordinates (1fz7.pdb1.gz) 373 Kb
  • LPC: Ligand-Protein Contacts for 1FZ7
  • CSU: Contacts of Structural Units for 1FZ7
  • Likely Quarternary Molecular Structure file(s) for 1FZ7
  • Structure Factors (2015 Kb)
  • Retrieve 1FZ7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FZ7 from S2C, [Save to disk]
  • Re-refined 1fz7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1FZ7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1FZ7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FZ7, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fz7a_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1fz7b_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1fz7c_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1fz7d_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1fz7e_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1fz7f_, region F [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fz7_F] [1fz7_D] [1fz7_C] [1fz7_B] [1fz7] [1fz7_E] [1fz7_A]
  • SWISS-PROT database: [P22869] [P18798] [P11987]
  • Domain organization of [MEMA_METCA] [MEMB_METCA] [MEMG_METCA] by SWISSPFAM
  • Other resources with information on 1FZ7
  • Community annotation for 1FZ7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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