1G26 Cytokine date Oct 17, 2000
title The Solution Structure Of A Well-Folded Peptide Based On The Residue Amino-Terminal Subdomain Of Human Granulin A
authors D.Tolkatchev, A.Ng, W.Vranken, F.Ni
compound source
Molecule: Granulin A
Chain: A
Fragment: N-Terminal Domain (Residues 1-31)
Synonym: Hga
Engineered: Yes
Mutation: Yes
Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized Using Fmoc Chemistry And Oxidized By Air In Solution, Cys17 And C Blocked With S-Acetamidomethyl Groups (Acm)
methodSolution NMR
Primary referenceDesign and solution structure of a well-folded stack of two beta-hairpins based on the amino-terminal fragment of human granulin A., Tolkatchev D, Ng A, Vranken W, Ni F, Biochemistry 2000 Mar 21;39(11):2878-86. PMID:10715107
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (76 Kb) [Save to disk]
  • Biological Unit Coordinates (1g26.pdb1.gz) 7 Kb
  • CSU: Contacts of Structural Units for 1G26
  • Original NMR restraints for 1G26 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1G26 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G26 from S2C, [Save to disk]
  • View 1G26 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1G26
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G26, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1g26a_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g26] [1g26_A]
  • SWISS-PROT database: [P28799]
  • Domain organization of [GRN_HUMAN] by SWISSPFAM
  • Domain found in 1G26: [GRAN ] by SMART
  • Other resources with information on 1G26
  • Community annotation for 1G26 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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