1G2T Cytokine date Oct 20, 2000
title Solution Structure Of Eotaxin-3
authors J.Ye, K.L.Mayer, M.R.Mayer, M.J.Stone
compound source
Molecule: Eotaxin-3
Chain: A
Synonym: Small Inducible Cytokine A26, Macrophage Inflammat Protein 4-Alpha;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Organ: Lung
Gene: Eotaxin-3
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a+
methodSolution NMR
related structures by homologous chain: 1G2S
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR solution structure and backbone dynamics of the CC chemokine eotaxin-3., Ye J, Mayer KL, Mayer MR, Stone MJ, Biochemistry 2001 Jul 3;40(26):7820-31. PMID:11425309
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (402 Kb) [Save to disk]
  • Biological Unit Coordinates (1g2t.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 1G2T
  • Original NMR restraints for 1G2T from PDB
  • Retrieve 1G2T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1G2T from S2C, [Save to disk]
    • View 1G2T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
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    • Visual 3D analysis of 1G2T
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1G2T, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1g2ta_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
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    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1g2t_A] [1g2t]
  • SWISS-PROT database: [Q9Y258]
  • Domain organization of [CCL26_HUMAN] by SWISSPFAM
  • Domain found in 1G2T: [SCY ] by SMART
    • Other resources with information on 1G2T
  • Community annotation for 1G2T at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
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